Available Modules

Package/Version Resource(s)
a5-miseq/20150522 Colonial One
abaqus/2017 Colonial One
abyss/1.5.2 Colonial One
abyss/2.0.2 Colonial One
adol-c/2.1.0 Colonial One
adol-c/2.6.1 Colonial One
afni/linux_openmp_64 Colonial One
agalma/0.5.0 Colonial One
allinea/4.2.1 Colonial One
allinea/4.2.2 Colonial One
allinea/5.0 Colonial One
allinea/reports Colonial One
allpaths-lg/current Colonial One
ampliconNoise/1.27 Colonial One
ampliconNoise/1.29 Colonial One
anaconda/2.5.0 Colonial One
anaconda/4.2.0 Colonial One
anaconda/4.3.1 Colonial One
aniCalculator/v1 Colonial One
annovar/2014-11-12 Colonial One
annovar/2017-07-16 Colonial One
ant/1.9.4 Colonial One
aoflagger/current Colonial One
aragorn/1.2.36 Colonial One
arb/5.5 Colonial One
aspera/3.7.5.539 Colonial One
atlasBlas/3.10.1 Colonial One
atlasBlas/3.10.3 Colonial One
aTRAM/1.04 Colonial One
autoconf/2.69 Colonial One
autoFact/v3.4 Colonial One
bamtools/2.3.0 Colonial One
barrnap/0.5 Colonial One
barrnap/0.8 Colonial One
bayeScan/2.1 Colonial One
bazel/0.2.2b Colonial One
bcftools/1.2 Colonial One
bcftools/1.3.1 Colonial One
beast/1.7.5 Colonial One
beast/1.8.0 Colonial One
beast/1.8.4 Colonial One
beast/2.0.2 Colonial One
beast/2.1.3 Colonial One
beast/2.2.0 Colonial One
beast/2.3.0 Colonial One
beast/2.3.2 Colonial One
beast/2.4.6 Colonial One
bedtools/2.20.1 Colonial One
bedtools/2.26.0 Colonial One
bibtool/2.55 Colonial One
binning/072015 Colonial One
binutils/2.23.2 Colonial One
biolite-tools/0.4.0 Colonial One
bioperl/1.6.0 Colonial One
bioperl/1.6.924 Colonial One
biopython/1.63 Colonial One
blas/gcc/1 Colonial One
blas/intel/1 Colonial One
blast-old/2.2.19 Colonial One
blast+/2.2.29 Colonial One
blast+/2.2.30+ Colonial One
blat/blat Colonial One
blcr/0.8.5 Colonial One
bless/v0.22 Colonial One
bless/v1.02 Colonial One
bmtagger/bmtagger Colonial One
bnpy/current Colonial One
boost/1.44 Colonial One
boost/1.56 Colonial One
boost/1.60 Colonial One
bowtie/1.0.0 Colonial One
bowtie2/2.1.0 Colonial One
bowtie2/2.2.1 Colonial One
bowtie2/2.2.3 Colonial One
bowtie2/2.2.9 Colonial One
bpp/3.1 Colonial One
bpp/3.3 Colonial One
bratNextGen/11.12.2012 Colonial One
bwa/0.7.12 Colonial One
bzip2/1.0.6 Colonial One
bzip2/current Colonial One
c1tools/current Colonial One
canu/v1.4 Colonial One
canu/v1.6 Colonial One
casa/4.4.0 Colonial One
casacore/current Colonial One
casarest/current Colonial One
cd-hit/4.6 Colonial One
cegma/2.5 Colonial One
cernlib/2006b/i686-slc5-gcc34-opt Colonial One
cfitsio/3.370 Colonial One
CGM/CGM Colonial One
checkm/1.0.4 Colonial One
clang/current Colonial One
clark/1.2.3 Colonial One
clonalFrameML/1.0.19 Colonial One
clustalw2/2.1 Colonial One
cmake/2.8.12 Colonial One
cmake/2.8.12.1 Colonial One
cmake/2.8.12.1_intel Colonial One
cmake/3.3.1 Colonial One
cmake/3.9.2 Colonial One
cpan/cpan Colonial One
cuda/drivers/331.89 Colonial One
cuda/drivers/352.63 Colonial One
cuda/drivers/390.25 Colonial One
cuda/libs/cudnn Colonial One
cuda/toolkit/5.0 Colonial One
cuda/toolkit/6.0 Colonial One
cuda/toolkit/6.5 Colonial One
cuda/toolkit/7.5 Colonial One
cuda/toolkit/8.0 Colonial One
cuda/toolkit/9.1 Colonial One
cufflinks/2.1.1 Colonial One
cufflinks/2.2.1 Colonial One
curl/7.51.0 Colonial One
current/0.2rc-1 Colonial One
cushaw3/3.0.3 Colonial One
ddd/v3.3.12 Colonial One
deconseq/0.4.3 Colonial One
deprecated-bright/1 Colonial One
detonate/20140123 Colonial One
dmtcp/2.4.0-rc2 Colonial One
dmtcp/2.4.4 Colonial One
dmtcp/current Colonial One
double_conversion/double_conversion Colonial One
doxygen/1.8.7 Colonial One
dualbrothers/1.1 Colonial One

 

Package/Version Resource(s)
ea-utils/current Colonial One
edirect/current Colonial One
emacs/24.5 Colonial One
emboss/6.5.0 Colonial One
emboss/6.6.0 Colonial One
exabayes/1.3.1 Colonial One
exabayes/1.4.1 Colonial One
exabayes/1.5 Colonial One
examl/intel/1.0.8 Colonial One
examl/intel/2.0 Colonial One
examl/intel/3.0 Colonial One
exonerate/2.4.0 Colonial One
expat/2.1.1 Colonial One
falcon/1.8.7 Colonial One
fastME/2.1.5 Colonial One
fastML/3.1 Colonial One
fastQC/0.11.5 Colonial One
fasttree/2.1.8 Colonial One
fastx/0.0.13 Colonial One
ffmpeg/gcc/2.3 Colonial One
ffmpeg/gcc/2.8.6 Colonial One
ffmpeg/gcc/3.0 Colonial One
fftw3/gcc/64/3.3.3 Colonial One
fftw3/gcc/64/3.3.5 Colonial One
fftw3/intel/64/3.3.3 Colonial One
fineStructure/2.0.7 Colonial One
fineStructure/2.0.8 Colonial One
flex/2.5.39 Colonial One
freebayes/freebayes Colonial One
freesurfer/v5.3.0 Colonial One
freetype/2.5.5 Colonial One
fsl/gcc/5.0.7 Colonial One
gam-ngs/v1.1b Colonial One
garli/2.01 Colonial One
garm/0.7.5 Colonial One
gatk/3.4-46 Colonial One
gatk/4.0.2.1 Colonial One
gblocks/0.91b Colonial One
gcc/4.7.4 Colonial One
gcc/4.8.5 Colonial One
gcc/4.9.0 Colonial One
gcc/4.9.2 Colonial One
gcc/5.2.1 Colonial One
gd/2.1.0 Colonial One
gdal/gcc/1.11 Colonial One
gdal/gcc/2.2.0 Colonial One
gdb/8.0 Colonial One
geant4/10.0 Colonial One
geant4/9.6p03 Colonial One
gene_torrent/3.8.5a Colonial One
geneid/1.4.4 Colonial One
genewise/2.4.1 Colonial One
geos/3.6 Colonial One
ghc/7.8.3 Colonial One
git-lfs/2.3.4 Colonial One
git/1.8.3.1 Colonial One
git/2.1.0 Colonial One
git/adamTest Colonial One
glibc/2.15 Colonial One
glibc/2.17.sh Colonial One
globetrotter/12-27-2015 Colonial One
glpk/4.55 Colonial One
gmap/2013 Colonial One
gmap/2015 Colonial One
gmap/2016 Colonial One
gnuplot/4.6.4 Colonial One
gperf/3.1 Colonial One
grace/5.1.23 Colonial One
gromacs/gcc/4.6.4 Colonial One
gromacs/intel/4.6.5 Colonial One
gsl/gcc/1.15 Colonial One
gsl/gcc/1.16 Colonial One
gsl/gcc/2.3 Colonial One
gsl/intel/1.15 Colonial One
gstreamer/0.10.36 Colonial One
gubbins/1.4.2 Colonial One
gubbins/2.1.0 Colonial One
hadoop/2.6.0 Colonial One
hamstr/13.2.3 Colonial One
hdf5/1.8.13 Colonial One
hdf5/1.8.15 Colonial One
heasoft/6.16 Colonial One
helisphere/1.2.740 Colonial One
hisat2/2.0.4 Colonial One
hmmer/2.3.2 Colonial One
hmmer/3.1b1 Colonial One
hpn-ssh/6.1p1 Colonial One
htslib/1.3 Colonial One
htslib/1.3.2 Colonial One
hyphy/2.2.4 Colonial One
hyphy/2.3.4 Colonial One

 

Package/Version Resource(s)
icu/59.1 Colonial One
idba-ud/1.1.1 Colonial One
ima2/8.27.12 Colonial One
infernal/1.1.1 Colonial One
intel/2013.0.028 Colonial One
interProScan/5.8.49 Colonial One
iq-tree/1.6 Colonial One
iva/1.0.0 Colonial One
jags/3.4.0 Colonial One
jags/4.1.0 Colonial One
jags/4.2.0 Colonial One
jags/current Colonial One
jdk/1.6.0 Colonial One
jdk/1.7.0 Colonial One
jdk/1.8.0 Colonial One
jdk/1.8.0_31 Colonial One
jellyfish/1.1.11 Colonial One
jellyfish/2.1.3 Colonial One
jemalloc/3.6.0 Colonial One
jml/1.3.0 Colonial One
jmodeltest2/2.1.4 Colonial One
julia/0.62 Colonial One
julia/pkg_non_shared/0.4 Colonial One
julia/pkg_shared/0.35 Colonial One
julia/pkg_shared/0.4 Colonial One
julia/pkg_shared/0.4x Colonial One
kmc/2.1.1 Colonial One
kraken/0.10.5-beta Colonial One
lamarc/2.1.9 Colonial One
lapack/gcc/3.4.1 Colonial One
lapack/gcc/3.5.0 Colonial One
lapack/intel/3.4.1 Colonial One
lasso/3.0.0 Colonial One
lastz/1.02 Colonial One
lesstif/0.95.2 Colonial One
lftp/4.7.5 Colonial One
lftp/4.8.3 Colonial One
libbsd/current Colonial One
libcfu/0.03 Colonial One
libiconv/current Colonial One
libxml2/2.9.2 Colonial One
libxslt/1.1.29 Colonial One
lofar/current Colonial One
luajit/2.0 Colonial One
mafft/7.130b Colonial One
magus/1.0 Colonial One
mason2/2.0.0-b1 Colonial One
matchAnnot/20150611 Colonial One
mathematica/10.0.1 Colonial One
mathematica/10.4.1 Colonial One
mathematica/11.0.1 Colonial One
matlab/r2013b Colonial One
matlab/r2014b Colonial One
matlab/r2017a Colonial One
matlab/r2017a.bi Colonial One
mcl/12.068 Colonial One
megacc/7.0.26-1 Colonial One
mercurial/3.2 Colonial One
mesa/7.9.2 Colonial One
meshkit/meshkit Colonial One
metaPhlAn/2.0 Colonial One
metassembler/1.5 Colonial One
migrate/3.6.4 Colonial One
minced/0.1.6 Colonial One
miniconda/miniconda2 Colonial One
miniconda/miniconda3 Colonial One
minpath/1.2 Colonial One
miRDeep2/2.0.0.7 Colonial One
miRExpress/2.1.4 Colonial One
moab/4.6.3 Colonial One
mocat/1.3 Colonial One
mosaik/2.1.73 Colonial One
mothur/1.35.1 Colonial One
mp-est/1.4 Colonial One
mpfr/3.1.6 Colonial One
mpiBlast/1.6.0 Colonial One
mpich/3.1.4 Colonial One
mrbayes-gpu/2.1.1 Colonial One
mrbayes/3.2.1 Colonial One
mrbayes/3.2.2 Colonial One
mrbayes/3.2.4 Colonial One
mrbayes/3.2.5 Colonial One
mrbayes/3.2.6 Colonial One
mrbayes/3.2.6-old Colonial One
mummer/3.23 Colonial One
mumps/5.1.1 Colonial One
muscle/3.8.31 Colonial One
muTect/1.1.4 Colonial One

 

Package/Version Resource(s)
nasp/0.9.9 Colonial One
nasp/1.0 Colonial One
ncbi_tools/12.0.0 Colonial One
ncbi-sra/2.5.2 Colonial One
netcdf/4.3.3.1 Colonial One
ngsTools/current Colonial One
nlopt/2.2.4 Colonial One
nlopt/2.4.2 Colonial One
novoalign/3.03.02 Colonial One
nvptx-tools/current Colonial One
nwchem/6.5 Colonial One
ocaml/4.05.0 Colonial One
ocamlbuild/0.11.0 Colonial One
oma/0.99 Colonial One
ompp/gcc/0.8.3 Colonial One
ompp/gcc/current Colonial One
opam/2.0.0-beta3 Colonial One
openbabel/2.3.2 Colonial One
openblas/openblas Colonial One
OpenBUGS/3.2.3 Colonial One
opencascade/6.9.0 Colonial One
openfoam/gcc/2.3.0 Colonial One
openmpi/1.8/gcc/4.7/cpu Colonial One
openmpi/1.8/gcc/4.7/cuda Colonial One
openmpi/1.8/gcc/4.9.2/cpu Colonial One
openmpi/current Colonial One
openmpi/gcc/64/1.6.5 Colonial One
openmpi/gcc/64/1.7.4 Colonial One
openmpi/gcc/64/1.8 Colonial One
openmpi/intel/64/1.6.5 Colonial One
openmpi/intel/64/1.7.4 Colonial One
openmpi/intel/current Colonial One
openmpi/Rmpi/current Colonial One
opensees/5868 Colonial One
opensees/parallel Colonial One
orthoFinder/1.1.4 Colonial One
paml/4.7 Colonial One
pandoc/2.0.3 Colonial One
panoply/current Colonial One
parallel/20141022 Colonial One
paraview/4.1.0 Colonial One
paraview/5.4.1 Colonial One
pari/2.7.1 Colonial One
partitionfinder2/2.1.1 Colonial One
pasta/1.6.4 Colonial One
pathoscope/2.0 Colonial One
paup/4.0a147 Colonial One
pcre/8.38 Colonial One
pcre/8.41 Colonial One
pear/0.9.5 Colonial One
perl5/5.22.1 Colonial One
perl5/5.26.1 Colonial One
pgi/10.5 Colonial One
phlawd/3.3a Colonial One
phylobayes/4.1c Colonial One
phylobayes/mpi/1.7 Colonial One
phylomark/v1.4 Colonial One
phyML/3.1 Colonial One
picard-tools/1.129 Colonial One
picard-tools/1.96 Colonial One
picard-tools/2.6.0 Colonial One
picrust/1.0.0 Colonial One
platanus/1.2.4 Colonial One
postgresql/current Colonial One
pplacer/v1.1 Colonial One
prank/v.140603 Colonial One
price/1.2 Colonial One
prodigal/2.60 Colonial One
progressiveCactus/current Colonial One
proj.4/4.7 Colonial One
proj.4/4.8.0 Colonial One
prokka/1.10 Colonial One
prokka/1.2 Colonial One
prokka/testing Colonial One
prottest/3.4 Colonial One
pycharm/current Colonial One
pycuda/2015.1.3 Colonial One
python/2.7.11 Colonial One
python/2.7.5 Colonial One
python/2.7.6 Colonial One
python/3.4.2 Colonial One
python/current Colonial One
python2.7/2.7.6 Colonial One
python2.7/current Colonial One
python3/3.5.2 Colonial One
qiime/1.8.0 Colonial One
qiime/1.9.1 Colonial One
qt/3.3.8 Colonial One
qt/4.8.2 Colonial One
qt/4.8.6 Colonial One
qt/5.4.2 Colonial One
qt/5.6.2 Colonial One
qt/5.8.0 Colonial One
qtrim/1.1 Colonial One
quake/0.3 Colonial One
quast/2.3.0 Colonial One
quast/4.1.0 Colonial One
quicktree/1.1 Colonial One
qwt/4.2.0 Colonial One
qwt/6.1.3 Colonial One
R/3.0.2 Colonial One
r/3.0.2 Colonial One
R/3.1.1 Colonial One
r/3.1.1 Colonial One
R/3.3.3 Colonial One
r/3.3.3 Colonial One
R/3.4.2 Colonial One
r/3.4.2 Colonial One
R/current Colonial One
r/current Colonial One
ragout/1.2b Colonial One
rammcap/rammcap Colonial One
randfold/2.0 Colonial One
raxml-light/1.1.1 Colonial One
raxml/8.0.14 Colonial One
raxml/8.1.23 Colonial One
raxml/8.2.9 Colonial One
ray/2.3.1 Colonial One
rDnaTools/1.0 Colonial One
recycler/v0.6 Colonial One
rediTools/1.0.3 Colonial One
repeatMasker/4.0.5 Colonial One
revbayes/1.0.4 Colonial One
rmblast/2.2.28 Colonial One
rna-star/star Colonial One
rna2dnalign/1.0.11 Colonial One
rna2dnalign/1.0.7 Colonial One
rna2dnalign/1.0.8 Colonial One
rna2dnalign/1.0.9 Colonial One
rnammer/1.2 Colonial One
roary/3.2.7 Colonial One
roary/3.5.7 Colonial One
roary/3.7.0 Colonial One
root/v5.34.20/gcc4.7 Colonial One
rosetta/3.8 Colonial One
rsem/1.2.11 Colonial One
rsem/1.3.0 Colonial One
rsync/3.1.2 Colonial One
ruby/2.3.1 Colonial One

 

Package/Version Resource(s)
sage/8.1 Colonial One
samtools/0.1.18 Colonial One
samtools/0.1.19 Colonial One
samtools/1.2 Colonial One
samtools/1.3.1 Colonial One
sas/9.3 Colonial One
sas/9.4 Colonial One
scaffMatch/0.9 Colonial One
scaLAPACK/2.0.2 Colonial One
scaLAPACK/2.0.2_new Colonial One
scons/2.3.1 Colonial One
sga/0.10.13 Colonial One
sibelia/3.0.6 Colonial One
siesta/parallel Colonial One
siesta/serial Colonial One
signalP/4.1 Colonial One
simx/2.3.0 Colonial One
sina/1.2.11 Colonial One
singularity/2.3.1 Colonial One
singularity/2.4.2 Colonial One
slurm/14.11.3 Colonial One
slurm/14.11.4 Colonial One
slurm/14.11.5 Colonial One
slurm/14.11.7 Colonial One
slurm/15.08.1 Colonial One
slurm/15.08.3 Colonial One
slurm/17.02.8 Colonial One
smalt/0.7.6 Colonial One
smrt_analysis/2.3.0 Colonial One
snap/1.0b22 Colonial One
snplice/1.7.2 Colonial One
snplice/1.7.4 Colonial One
snplice/1.8.0 Colonial One
SOAPdenovo2/2.04-r240 Colonial One
SolSNP/1.1 Colonial One
spades/3.10.0 Colonial One
spades/3.5.0 Colonial One
spades/3.7.1 Colonial One
spades/3.9.0 Colonial One
sparsehash/2.0.2 Colonial One
sqlite/3.12.2 Colonial One
sqlite/3.8.8.3 Colonial One
squid/1.9g Colonial One
sra/2.5.4-1 Colonial One
sra/2.8.1 Colonial One
srst2/0.1.5 Colonial One
sspace/3.0 Colonial One
stack/1.5.1 Colonial One
stacks/1.42 Colonial One
star/2.5 Colonial One
statamp/13 Colonial One
stringtie/1.2.4 Colonial One
sundials/gcc/2.5.0 Colonial One
svsolver/2017.8.23 Colonial One
swig/3.0.4 Colonial One
swig/3.0.7 Colonial One
t_coffee/v11.00 Colonial One
tbl2asn/23.7 Colonial One
tcl/8.5 Colonial One
tcl/8.6 Colonial One
tecplot/2014r2 Colonial One
tex-live/2014 Colonial One
texinfo/6.3 Colonial One
tk/8.6 Colonial One
tmhmm/2.0c Colonial One
tophat/2.0.11 Colonial One
tophat/2.0.12 Colonial One
tophat/2.1.1 Colonial One
torch/7 Colonial One
transdecoder/3.0.0 Colonial One
transdecoder/r2012-08-15 Colonial One
trap/current Colonial One
treePL/1.0 Colonial One
trimAl/v1.2 Colonial One
trimmomatic/0.33 Colonial One
trinity/r20131110 Colonial One
trinity/r20140413p1 Colonial One
trinity/r20140717 Colonial One
trinity/testVersion Colonial One
trinity/v2.0.2 Colonial One
trinity/v2.0.3 Colonial One
trinity/v2.0.6 Colonial One
trinity/v2.2.0 Colonial One
trinity/v2.4.0 Colonial One
trinity/v2.5.1 Colonial One
trinotate/2.0.1 Colonial One
trinotate/3.0.1 Colonial One
trinotate/r20131110 Colonial One
twoBitToFa/twoBitToFa Colonial One
udunits/2.2.25 Colonial One
usearch/6.0.307 Colonial One
usearch/7.0.1090 Colonial One
usearch/9.2.64 Colonial One
v-fat/current Colonial One
valgrind/3.12.0 Colonial One
VarScan/2.3.7 Colonial One
vcftools/0.1.13 Colonial One
velvet/1.2.10 Colonial One
vicuna/v1.3 Colonial One
viennaRNA/2.2.0-RC3 Colonial One
vsearch/v1.10.2 Colonial One
vsearch/v2.0.3 Colonial One
vsearch/v2.6.0 Colonial One
vtk/7.1.1 Colonial One
wcslib/5.11 Colonial One
word2vec/0.1c Colonial One
Xaw/current Colonial One
xvfb/current Colonial One
xz/5.2.2 Colonial One
xz/5.2.3 Colonial One
yasm/gcc/1.2.0 Colonial One
zlib/1.2.7 Colonial One
zlib/1.2.8 Colonial One

 

Last Updated: March 16, 2018